STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020848Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab. (788 aa)    
Predicted Functional Partners:
nrp1
Neuropilin 1.
    
 0.965
ENSGMOP00000002677
Macrophage stimulating 1 receptor b.
    
 0.749
ENSGMOP00000009026
MET proto-oncogene, receptor tyrosine kinase.
    
 0.749
ENSGMOP00000017608
Macrophage stimulating 1 receptor a.
    
 0.749
ENSGMOP00000009680
annotation not available
    
 0.701
cdk5
Cyclin dependent kinase 5.
     
 0.658
ENSGMOP00000012392
LIM domain kinase 1a.
    
 0.620
ENSGMOP00000001784
annotation not available
    
 0.617
ENSGMOP00000008088
Plexin A2.
    
 0.617
PLXNA2
Plexin A2.
    
 0.617
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.