STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020856Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D. (770 aa)    
Predicted Functional Partners:
nrp1
Neuropilin 1.
    
 0.928
ENSGMOP00000020840
annotation not available
 
      0.848
ENSGMOP00000002677
Macrophage stimulating 1 receptor b.
    
 0.749
ENSGMOP00000009026
MET proto-oncogene, receptor tyrosine kinase.
    
 0.749
ENSGMOP00000017608
Macrophage stimulating 1 receptor a.
    
 0.749
ENSGMOP00000020152
Tetraspanin 11.
   
  
 0.540
ENSGMOP00000009680
annotation not available
    
 0.520
ENSGMOP00000001784
annotation not available
    
 0.497
ENSGMOP00000008088
Plexin A2.
    
 0.497
PLXNA2
Plexin A2.
    
 0.497
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.