STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020859Ryanodine receptor 1b (skeletal). (4863 aa)    
Predicted Functional Partners:
ENSGMOP00000014863
annotation not available
   
 0.816
ENSGMOP00000007316
Calmodulin 2a (phosphorylase kinase, delta).
    
 0.808
calm1
Calmodulin 1.
    
 0.808
CALML3
Calmodulin like 3.
    
 0.808
ENSGMOP00000020594
annotation not available
    
 0.808
LOC115548686
Peptidyl-prolyl cis-trans isomerase FKBP1A-like.
    
 0.775
ENSGMOP00000009047
Calmodulin-like 4a.
    
 0.775
ENSGMOP00000011246
FKBP prolyl isomerase 1B.
    
 0.775
ENSGMOP00000021109
FKBP prolyl isomerase 1Aa.
    
 0.775
ENSGMOP00000012727
FKBP prolyl isomerase 3.
    
 0.752
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.