STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020882Solute carrier family 18 member B1. (391 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.764
CASK
Calcium/calmodulin dependent serine protein kinase.
     
 0.758
ENSGMOP00000017627
annotation not available
     
 0.758
ENSGMOP00000006796
CCCTC-binding factor (zinc finger protein).
      
 0.709
ENSGMOP00000003734
annotation not available
     
 0.668
LOC115557836
Vesicular inhibitory amino acid transporter.
     
 0.668
ENSGMOP00000010194
annotation not available
     
 0.668
ENSGMOP00000003851
annotation not available
     
 0.653
SNCG
Synuclein gamma.
     
 0.653
ENSGMOP00000017279
General transcription factor IIA, 1-like.
     
 0.609
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.