STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000020903PHD finger protein 13. (313 aa)    
Predicted Functional Partners:
mcrs1
Microspherule protein 1.
   
 0.901
ENSGMOP00000012281
KAT8 regulatory NSL complex subunit 2.
    
 0.887
ENSGMOP00000006196
KAT8 regulatory NSL complex subunit 3.
    
 0.861
ENSGMOP00000016991
annotation not available
    
 0.861
ENSGMOP00000002131
PR domain containing 4.
    
 0.790
ENSGMOP00000006650
annotation not available
    
 0.790
ENSGMOP00000012899
PR domain containing 5.
    
 0.790
ENSGMOP00000016230
annotation not available
    
 0.790
tbx20
T-box transcription factor 20.
    
   0.778
ENSGMOP00000018314
annotation not available
   
 0.767
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.