STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021067Ornithine decarboxylase antizyme 2b. (178 aa)    
Predicted Functional Partners:
ENSGMOP00000004527
Ornithine decarboxylase 1.
    
 0.924
ENSGMOP00000016651
Antizyme inhibitor 1b.
    
 0.908
ENSGMOP00000019818
Antizyme inhibitor 1a.
    
 0.908
ENSGMOP00000009128
Proteasome 20S subunit beta 4.
   
  0.660
psma8
Proteasome 20S subunit alpha 8.
   
 
  0.636
ENSGMOP00000012561
Proteasome 26S subunit, non-ATPase 3.
   
 
 0.628
ENSGMOP00000010168
Proteasome 20S subunit beta 2.
   
 
 0.620
ENSGMOP00000003363
annotation not available
   
 
  0.618
psma5
Proteasome 20S subunit alpha 5.
   
 
  0.618
ENSGMOP00000016643
Proteasome 20S subunit alpha 3.
   
 
  0.617
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.