STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021071Tpd52 like 2a. (141 aa)    
Predicted Functional Partners:
ENSGMOP00000004306
annotation not available
  
 
  
0.646
ENSGMOP00000007735
Tpd52 like 1.
  
 
 
0.618
ENSGMOP00000011671
SNAP associated protein.
   
 
  0.617
ENSGMOP00000007296
GA binding protein transcription factor subunit beta 2a.
    
  0.597
ENSGMOP00000010544
annotation not available
    
  0.597
ENSGMOP00000015534
Sorting nexin 6.
   
 
  0.595
ENSGMOP00000019695
Sorting nexin 5.
   
 
  0.595
ENSGMOP00000018146
Mal, T cell differentiation protein 2 (gene/pseudogene).
   
 
 0.479
ENSGMOP00000003423
GA binding protein transcription factor subunit alpha.
    
   0.459
ENSGMOP00000015056
Negative regulator of ubiquitin-like proteins 1.
      
 0.445
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.