STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021077Forkhead box G1b. (203 aa)    
Predicted Functional Partners:
MECP2
methyl-CpG binding protein 2.
    
 0.808
ENSGMOP00000014791
Small nuclear ribonucleoprotein D2 polypeptide.
 
   
 0.807
ENSGMOP00000002141
annotation not available
     
 0.765
ENSGMOP00000006110
annotation not available
    
 0.759
ENSGMOP00000011166
ATG7 autophagy related 7 homolog (S. cerevisiae).
   
 0.701
ENSGMOP00000018356
Serum/glucocorticoid regulated kinase family member 3.
    
 0.699
ENSGMOP00000000295
annotation not available
    
 0.695
SMAD4
SMAD family member 4.
    
 0.695
ENSGMOP00000014927
SMAD family member 4b.
    
 0.695
ENSGMOP00000015387
annotation not available
    
 0.678
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.