STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021104Acetylserotonin O-methyltransferase-like. (590 aa)    
Predicted Functional Partners:
ENSGMOP00000013275
Tryptophan 2,3-dioxygenase a.
    
 
 0.994
LOC115560896
Serotonin N-acetyltransferase-like.
  
 
 0.947
ENSGMOP00000011553
Arylalkylamine N-acetyltransferase 1.
  
 
 0.947
ENSGMOP00000014543
Aldehyde dehydrogenase 7 family, member A1.
  
 
 0.920
ENSGMOP00000006235
Spermidine/spermine N1-acetyltransferase family member 2b.
  
 
 0.914
ENSGMOP00000007356
annotation not available
  
 
 0.914
ENSGMOP00000014606
Spermidine/spermine N1-acetyltransferase family member 2a.
  
 
 0.914
ENSGMOP00000018222
Glucosamine-phosphate N-acetyltransferase 1.
  
 
 0.914
ENSGMOP00000007197
annotation not available
  
 
 0.911
ENSGMOP00000009690
Aldehyde dehydrogenase 3 family, member A1.
  
 
 0.911
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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