STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021147Polyglutamine binding protein 1. (235 aa)    
Predicted Functional Partners:
txnl4a
Thioredoxin like 4A.
   
 0.982
ENSGMOP00000011036
annotation not available
    
 0.966
txnl4b
Thioredoxin like 4B.
   
 0.956
UBL5
Ubiquitin like 5.
   
  0.733
ENSGMOP00000005098
Catenin, beta like 1.
   
 
  0.725
ENSGMOP00000010571
Aly/REF export factor.
    
  0.725
ENSGMOP00000009200
annotation not available
     
 0.724
ENSGMOP00000003179
Zinc finger, matrin-type 2.
   
 
 0.696
ENSGMOP00000014632
CD2 (cytoplasmic tail) binding protein 2.
    
 
 0.691
ENSGMOP00000014026
annotation not available
    
  0.688
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.