STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021164Testis specific protein Y-linked. (218 aa)    
Predicted Functional Partners:
LOC115546069
Histone H2A.V.
   
 
 0.855
H2AZ1
H2A.Z variant histone 1.
   
 
 0.855
ASF1B
Histone chaperone asf1b-B.
   
 
 0.777
ENSGMOP00000002502
annotation not available
   
 0.772
ENSGMOP00000002982
annotation not available
   
 0.772
ENSGMOP00000016858
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member A.
   
 0.772
ENSGMOP00000017602
Acidic (leucine-rich) nuclear phosphoprotein 32 family, member B.
   
 0.772
wdr13
WD repeat domain 13.
    
 
 0.770
LOC115540663
Exportin-1-like.
    
  0.665
ENSGMOP00000013739
annotation not available
    
 0.665
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.