STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115551540Potassium voltage-gated channel subfamily A member 1-like. (492 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.966
ENSGMOP00000015972
Ribosomal protein L23a.
  
 0.854
ENSGMOP00000002317
Ribosomal protein L30.
   
 0.852
rpl29
Ribosomal protein L29.
   
 0.846
ENSGMOP00000003830
Ribosomal protein L24.
  
 0.845
rpl35
Ribosomal protein L35.
  
 0.845
ENSGMOP00000019324
Ribosomal protein L32.
  
 0.843
ENSGMOP00000001973
Ribosomal protein L35a.
   
 0.837
rpl34
Ribosomal protein L34.
  
 0.836
ENSGMOP00000012253
Ribosomal protein L36A.
  
 0.835
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.