STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021553annotation not available (75 aa)    
Predicted Functional Partners:
ENSGMOP00000008974
Prothymosin alpha a.
    
 
 0.600
ENSGMOP00000003379
NSA2 ribosome biogenesis homolog (S. cerevisiae).
    
 
 0.551
ENSGMOP00000003705
annotation not available
      
 0.523
ENSGMOP00000000324
SAGA complex associated factor 29.
      
 0.518
tufm
Tu translation elongation factor, mitochondrial.
      
 0.516
ENSGMOP00000021250
annotation not available
    
 
 0.480
ENSGMOP00000003363
annotation not available
    
   0.434
ENSGMOP00000006391
ChaC, cation transport regulator homolog 1 (E. coli).
   
  
 0.419
ENSGMOP00000008291
Tumor protein p53.
    
 
 0.419
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.