STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021679Neurite extension and migration factor b. (1279 aa)    
Predicted Functional Partners:
ENSGMOP00000006321
Ring finger protein, LIM domain interacting.
 
    
 0.499
ENSGMOP00000006776
COP1 E3 ubiquitin ligase.
      
 0.463
ENSGMOP00000006156
annotation not available
      
 0.459
ENSGMOP00000016505
Ring finger protein (C3H2C3 type) 6.
 
    
 0.440
ENSGMOP00000011977
Epoxide hydrolase 4.
      
 0.410
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.