STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000021779Gamma-glutamylamine cyclotransferase, tandem duplicate 3. (153 aa)    
Predicted Functional Partners:
ENSGMOP00000017097
Cystathionase (cystathionine gamma-lyase), like.
     
 0.896
CBS
Cystathionine beta-synthase.
    
 0.874
ENSGMOP00000010725
5-oxoprolinase, ATP-hydrolysing.
    
 0.851
ENSGMOP00000017145
Ribosomal modification protein rimK-like family member A.
    
  0.842
ENSGMOP00000017029
Branched chain keto acid dehydrogenase E1 subunit alpha.
    
  0.798
ENSGMOP00000015221
ChaC, cation transport regulator homolog 2 (E. coli).
     
 0.781
ENSGMOP00000006302
annotation not available
  
 
  0.775
ENSGMOP00000008354
Phosphoglucomutase 5.
  
 
  0.775
ENSGMOP00000019697
Phosphoglucomutase 1.
  
 
  0.775
ENSGMOP00000006391
ChaC, cation transport regulator homolog 1 (E. coli).
     
 0.774
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.