STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbb1Hemoglobin subunit beta-1; Involved in oxygen transport from gills to the various peripheral tissues. (74 aa)    
Predicted Functional Partners:
hba2
Hemoglobin subunit alpha-2; Involved in oxygen transport from gills to the various peripheral tissues.
  
  0.875
hba1
Hemoglobin subunit alpha-1; Involved in oxygen transport from gills to the various peripheral tissues; Belongs to the globin family.
  
 
0.820
LOC115530617
Hemoglobin subunit alpha-D-like.
  
  0.801
ENSGMOP00000004276
Hemoglobin alpha embryonic-3.
  
 
0.733
ENSGMOP00000017734
Cytochrome b5 reductase 4.
   
 0.704
ENSGMOP00000003145
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
  
     0.433
ENSGMOP00000010910
Myozenin 3a.
    
 0.433
zpld1
Zona pellucida like domain containing 1.
  
     0.426
HABP2
Hyaluronan binding protein 2.
    
  0.418
HGFAC
HGF activator.
    
  0.418
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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