STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000022014Si:ch211-81n22.1. (211 aa)    
Predicted Functional Partners:
ENSGMOP00000009996
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
 0.883
ENSGMOP00000017496
Small nuclear ribonucleoprotein polypeptide E.
    
 0.785
ENSGMOP00000014502
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.689
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
 0.689
ENSGMOP00000016603
N-acetyltransferase 8-like.
     
0.646
ENSGMOP00000017145
Ribosomal modification protein rimK-like family member A.
     
 0.630
ENSGMOP00000003241
Glutamic-oxaloacetic transaminase 2b, mitochondrial.
   
 
 0.607
ENSGMOP00000005784
Asparagine synthetase.
     
 0.599
ASS1
Argininosuccinate synthase 1.
   
 
  0.596
ENSGMOP00000011679
Aspartate dehydrogenase domain containing.
   
 
  0.590
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.