STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115554177ADP-ribosylation factor-like protein 4A. (204 aa)    
Predicted Functional Partners:
ENSGMOP00000014534
Intersectin 2b.
    
 0.879
ENSGMOP00000019906
Intersectin 2a.
    
 0.879
ENSGMOP00000018121
Intersectin 1 (SH3 domain protein).
    
 0.839
ENSGMOP00000012748
Coatomer protein complex, subunit gamma 2.
    
 0.820
ENSGMOP00000008496
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.814
ENSGMOP00000016127
ADP-ribosylation factor GTPase activating protein 1.
   
 0.795
ENSGMOP00000020322
SH3 and multiple ankyrin repeat domains 3a.
   
  0.778
ENSGMOP00000020800
annotation not available
   
  0.778
ENSGMOP00000017805
Cyclin G associated kinase.
    
 0.773
ENSGMOP00000001349
Coatomer protein complex, subunit beta 1.
   
 0.740
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.