STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000022034annotation not available (47 aa)    
Predicted Functional Partners:
ENSGMOP00000005948
annotation not available
    
 0.875
ENSGMOP00000005330
annotation not available
    
  0.871
ENSGMOP00000005370
annotation not available
    
  0.871
ENSGMOP00000007297
F-box and WD repeat domain containing 11a.
    
 0.871
spopl
Speckle type BTB/POZ protein like.
   
 0.864
SPOP
Speckle type BTB/POZ protein.
   
 0.864
ENSGMOP00000010316
Kinesin family member 7.
    
 0.811
KIF27
Kinesin family member 27.
    
 0.811
ENSGMOP00000019170
Kinesin family member 21B.
    
 0.811
ENSGMOP00000017041
Smoothened, frizzled class receptor.
    
 0.771
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.