STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000022065annotation not available (84 aa)    
Predicted Functional Partners:
ENSGMOP00000015866
Interferon induced with helicase C domain 1.
   
  
 0.695
ENSGMOP00000011011
Radical S-adenosyl methionine domain containing 2.
   
  
 0.618
ENSGMOP00000001090
Danio rerio ring finger protein 213b (rnf213b), mRNA.
   
    0.607
ENSGMOP00000006153
annotation not available
   
    0.607
ENSGMOP00000006189
annotation not available
   
    0.607
RNF213
Ring finger protein 213.
   
    0.607
ENSGMOP00000003667
annotation not available
   
  
 0.603
ENSGMOP00000003726
annotation not available
   
  
 0.603
ENSGMOP00000012604
annotation not available
   
  
 0.603
ENSGMOP00000010233
Interferon regulatory factor 7.
   
  
 0.593
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.