STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CdsAUnannotated protein; Belongs to the CDS family. (271 aa)    
Predicted Functional Partners:
PlsC
Unannotated protein.
    
 0.929
PgsA
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.928
MEE_00729
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.916
Pcs
Unannotated protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.914
MmpA
Unannotated protein.
  
    0.910
atpB
Unannotated protein; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
   
  
 0.552
pyrH
Unannotated protein; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.526
GdhB
Unannotated protein.
   
    0.503
ispDF
Unannotated protein; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); Belongs to the IspF family. In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
  
  
 0.502
tpiA
Unannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
  
 0.501
Your Current Organism:
Bartonella elizabethae
NCBI taxonomy Id: 807
Other names: ATCC 49927, B. elizabethae, Bartonella saintelizabethsina, CCUG 30455, CDC F9251, CIP 103761, Rochalimaea elizabethae, Rochalimaea saintelizabethsina, strain B91-002005, strain F9251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.