STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEE_00259Unannotated protein. (83 aa)    
Predicted Functional Partners:
MEE_01440
Unannotated protein.
  
     0.773
MEE_00416
Unannotated protein.
  
     0.772
MEE_00652
Unannotated protein.
  
     0.771
MEE_00417
Unannotated protein.
  
     0.771
MEE_01087
Unannotated protein.
  
     0.768
MEE_00644
Unannotated protein.
  
     0.766
Omp2b
Unannotated protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.765
MEE_01276
Unannotated protein.
  
     0.764
MEE_00415
Unannotated protein.
  
     0.761
MEE_00562
Unannotated protein.
  
     0.760
Your Current Organism:
Bartonella elizabethae
NCBI taxonomy Id: 807
Other names: ATCC 49927, B. elizabethae, Bartonella saintelizabethsina, CCUG 30455, CDC F9251, CIP 103761, Rochalimaea elizabethae, Rochalimaea saintelizabethsina, strain B91-002005, strain F9251
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