STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Omp2bUnannotated protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (404 aa)    
Predicted Functional Partners:
MEE_00419
Unannotated protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 0.929
MEE_00415
Unannotated protein.
  
 
 0.855
MEE_01276
Unannotated protein.
  
 
 0.855
MEE_00417
Unannotated protein.
  
 
 0.854
MEE_00652
Unannotated protein.
  
 
 0.853
MEE_00416
Unannotated protein.
  
 
 0.851
MEE_01440
Unannotated protein.
  
 
 0.850
MEE_00490
Unannotated protein.
  
     0.774
MEE_00902
Unannotated protein.
  
     0.772
MEE_00644
Unannotated protein.
  
     0.771
Your Current Organism:
Bartonella elizabethae
NCBI taxonomy Id: 807
Other names: ATCC 49927, B. elizabethae, Bartonella saintelizabethsina, CCUG 30455, CDC F9251, CIP 103761, Rochalimaea elizabethae, Rochalimaea saintelizabethsina, strain B91-002005, strain F9251
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.