STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105928913FAM20B glycosaminoglycan xylosylkinase. (409 aa)    
Predicted Functional Partners:
LOC105933538
Fam20C domain-containing protein.
  
 
0.822
ENSFHEP00000027035
Family with sequence similarity 20 member C, like.
  
 
0.822
LOC105933036
Extracellular serine/threonine protein kinase FAM20C.
  
 
0.820
LOC105929389
FAM20C golgi associated secretory pathway kinase.
  
 
0.820
mbtps1
Membrane-bound transcription factor peptidase, site 1.
     
 0.634
LOC105917613
WD40 repeat domain 95.
   
  0.628
LOC110369571
Uncharacterized protein.
   
  0.628
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
 0.622
LOC105922447
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.621
fjx1
Four-jointed box protein 1.
      
 0.617
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.