STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35d1UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter. (323 aa)    
Predicted Functional Partners:
coq4
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family.
 
      0.831
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 
 0.658
ENSFHEP00000001513
Uncharacterized protein.
   
  
 0.640
unc13a
Unc-13 homolog A.
   
  
 0.640
NXNL1
Nucleoredoxin like 1.
      
 0.636
tnpo2
Transportin 2 (importin 3, karyopherin beta 2b).
      
 0.636
mast3
Microtubule associated serine/threonine kinase 3b.
      
 0.636
KCNN1
CaMBD domain-containing protein.
   
  
 0.636
LOC105938314
TFIIS N-terminal domain-containing protein.
      
 0.636
LOC105917639
Relaxin-3.
      
 0.621
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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