STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr24WD repeat domain 24. (706 aa)    
Predicted Functional Partners:
nprl3
Nitrogen permease regulator 3-like protein.
    
 0.999
depdc5
DEP domain containing 5.
    
 0.999
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.999
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
0.999
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.999
wdr59
WD repeat domain 59.
    
0.999
ENSFHEP00000017385
Uncharacterized protein.
    
 0.996
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.996
LOC105927798
Ras-related GTP binding A.
    
 0.990
kptn
Kaptin (actin binding protein).
   
 0.990
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.