STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105919072Prokineticin receptor 1b; Belongs to the G-protein coupled receptor 1 family. (381 aa)    
Predicted Functional Partners:
LOC105934011
Prokineticin 2.
     
 0.814
prok1
Prokineticin 1.
     
 0.788
LOC110369193
Uncharacterized protein.
    
 0.711
LOC105923645
Endothelin 1.
    
  0.698
ENSFHEP00000033440
Uncharacterized protein.
    
  0.698
ENSFHEP00000013818
END domain-containing protein.
    
 0.683
ENSFHEP00000029378
NMU domain-containing protein.
    
 0.644
LOC105929179
Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family.
   
 
 
0.626
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.622
LOC105923210
Cholecystokinin a.
    
 0.618
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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