STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105928750Zgc:63972. (162 aa)    
Predicted Functional Partners:
LOC105923971
Heat shock 10 protein 1; Belongs to the GroES chaperonin family.
     
 0.593
cutc
CutC copper transporter homolog (E. coli).
      
 0.524
mocs1
Molybdenum cofactor biosynthesis protein 1.
     
 0.520
LOC105927216
Filamin binding LIM protein 1.
    
   0.501
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.493
ccs
Copper chaperone for superoxide dismutase.
     
 0.492
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
     
 0.479
ENSFHEP00000003316
Uncharacterized protein.
    
  0.453
ENSFHEP00000003320
Uncharacterized protein.
    
  0.453
LOC110366376
Adenine phosphoribosyltransferase.
    
  0.453
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.