Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSFHEP00000001331Coilin_N domain-containing protein. (117 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.719
traf7
TNF receptor-associated factor 7.
   
 0.665
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
     
 0.641
ifih1
Interferon induced with helicase C domain 1.
     
 0.641
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.606
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.606
bckdhb
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
   
 0.605
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.601
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.601
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.595
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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