STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plrg1Pleiotropic regulator 1. (445 aa)    
Predicted Functional Partners:
cwc15
CWC15 spliceosome associated protein homolog.
   
 0.999
bcas2
BCAS2 pre-mRNA processing factor.
   
 0.999
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 0.999
prpf19
Pre-mRNA-processing factor 19.
   
0.999
ctnnbl1
Catenin, beta like 1.
   
 0.998
LOC105937296
XPA binding protein 2.
   
 
 0.996
snw1
SNW domain containing 1.
   
 
 0.996
yju2
YJU2 splicing factor homolog.
    
 
 0.996
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 
 0.996
bud31
BUD31 homolog.
   
 
 0.996
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.