STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105926602Uncharacterized protein. (1259 aa)    
Predicted Functional Partners:
bmp8a
Bone morphogenetic protein 8a.
    
  0.562
LOC105932304
Bone morphogenetic protein 7b.
    
  0.483
LOC105920199
TGF_BETA_2 domain-containing protein.
    
  0.483
LOC105939150
Bone morphogenetic protein 16.
    
  0.483
cunh2orf81
Uncharacterized protein.
   
    0.483
ttll9
Tubulin tyrosine ligase-like family, member 9.
   
    0.483
bmp4
Bone morphogenetic protein 4.
    
  0.483
bmp2
Bone morphogenetic protein 2b.
    
  0.483
cep72
Centrosomal protein 72.
   
    0.483
bmp5
Bone morphogenetic protein 5.
    
  0.483
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.