STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105915612Ventrally expressed dharma/bozozok antagonist. (278 aa)    
Predicted Functional Partners:
LOC105933766
Forkhead box protein I1.
    
 
 0.641
LOC105935136
Pre-B-cell leukemia homeobox interacting protein 1a.
      
 0.512
guk1
Guanylate kinase 1a.
      
 0.512
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
      
 0.512
pbxip1
Pre-B-cell leukemia homeobox interacting protein 1b.
      
 0.512
LOC105936784
Guanylate kinase 1b.
      
 0.512
ENSFHEP00000010336
SRY-box transcription factor 32.
    
 
 0.497
LOC105936611
GATA binding protein 5.
    
 
 0.452
LOC105928937
Sp5 transcription factor-like.
    
 
 0.444
LOC105917898
Lysine (K)-specific demethylase 2Aa.
      
 0.420
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.