STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105940210Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (589 aa)    
Predicted Functional Partners:
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.902
LOC105919036
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.900
LOC105929358
Hydroxysteroid (20-beta) dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.893
LOC105935339
Cytochrome b5 reductase 4.
   
 0.733
ENSFHEP00000029713
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.733
LOC105920223
Malate synthase-like.
  
 
  0.724
gpcpd1
Glycerophosphocholine phosphodiesterase GPCPD1.
     
 0.708
gusb
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
   
 0.640
prep
Prolyl endopeptidase.
      
 0.637
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.623
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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