STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105926717Uncharacterized protein. (1139 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.991
LOC105937758
Uncharacterized protein.
    
 0.991
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.844
LOC105921523
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.844
ppfibp1
PPFIA binding protein 1b.
   
0.623
ENSFHEP00000019028
PPFIA binding protein 2a.
   
0.623
LOC105937598
Uncharacterized protein.
   
0.623
PPFIBP2
Uncharacterized protein.
   
0.623
git2
G protein-coupled receptor kinase interacting ArfGAP 2a.
    
 
 0.574
git1
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 
 0.574
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.