Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
nkx2-3 | poll | ENSFHEP00000001604 | ENSFHEP00000035164 | NK2 homeobox 3. | Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. | 0.515 |
nkx2-3 | wdr11 | ENSFHEP00000001604 | ENSFHEP00000015661 | NK2 homeobox 3. | WD repeat domain 11. | 0.518 |
poll | nkx2-3 | ENSFHEP00000035164 | ENSFHEP00000001604 | Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. | NK2 homeobox 3. | 0.515 |
poll | wdr11 | ENSFHEP00000035164 | ENSFHEP00000015661 | Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. | WD repeat domain 11. | 0.637 |
wdr11 | nkx2-3 | ENSFHEP00000015661 | ENSFHEP00000001604 | WD repeat domain 11. | NK2 homeobox 3. | 0.518 |
wdr11 | poll | ENSFHEP00000015661 | ENSFHEP00000035164 | WD repeat domain 11. | Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. | 0.637 |