STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf7Ring finger protein 7. (110 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
   
 0.997
ubxn7
UBX domain protein 7.
    
 0.993
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.992
cul2
Cullin 2; Belongs to the cullin family.
    
 0.991
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.979
LOC105918278
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.979
LOC105924888
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.979
ddb1
Damage-specific DNA binding protein 1.
    
 0.978
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.970
LOC105932814
Elongin B.
   
 0.969
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.