Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HDAC3 | LOC105924936 | ENSFHEP00000020300 | ENSFHEP00000009732 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | CREB binding protein b. | 0.794 |
| HDAC3 | LOC105938548 | ENSFHEP00000020300 | ENSFHEP00000001764 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Peroxisome proliferator-activated receptor alpha b. | 0.825 |
| HDAC3 | crebbp | ENSFHEP00000020300 | ENSFHEP00000010614 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | CREB binding protein a. | 0.794 |
| HDAC3 | med1 | ENSFHEP00000020300 | ENSFHEP00000014059 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.632 |
| HDAC3 | ncor1 | ENSFHEP00000020300 | ENSFHEP00000005640 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Nuclear receptor corepressor 1. | 0.977 |
| HDAC3 | ncor2 | ENSFHEP00000020300 | ENSFHEP00000000548 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Nuclear receptor corepressor 2. | 0.977 |
| HDAC3 | ppara | ENSFHEP00000020300 | ENSFHEP00000007555 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Peroxisome proliferator-activated receptor alpha a. | 0.534 |
| HDAC3 | rxra | ENSFHEP00000020300 | ENSFHEP00000029776 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Retinoid X receptor, alpha a. | 0.734 |
| HDAC3 | sirt1 | ENSFHEP00000020300 | ENSFHEP00000025372 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Sirtuin 1. | 0.685 |
| LOC105924936 | HDAC3 | ENSFHEP00000009732 | ENSFHEP00000020300 | CREB binding protein b. | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.794 |
| LOC105924936 | LOC105938548 | ENSFHEP00000009732 | ENSFHEP00000001764 | CREB binding protein b. | Peroxisome proliferator-activated receptor alpha b. | 0.873 |
| LOC105924936 | crebbp | ENSFHEP00000009732 | ENSFHEP00000010614 | CREB binding protein b. | CREB binding protein a. | 0.905 |
| LOC105924936 | med1 | ENSFHEP00000009732 | ENSFHEP00000014059 | CREB binding protein b. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.767 |
| LOC105924936 | ncor1 | ENSFHEP00000009732 | ENSFHEP00000005640 | CREB binding protein b. | Nuclear receptor corepressor 1. | 0.727 |
| LOC105924936 | ncor2 | ENSFHEP00000009732 | ENSFHEP00000000548 | CREB binding protein b. | Nuclear receptor corepressor 2. | 0.727 |
| LOC105924936 | ppara | ENSFHEP00000009732 | ENSFHEP00000007555 | CREB binding protein b. | Peroxisome proliferator-activated receptor alpha a. | 0.689 |
| LOC105924936 | ppargc1a | ENSFHEP00000009732 | ENSFHEP00000034300 | CREB binding protein b. | Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. | 0.784 |
| LOC105924936 | rxra | ENSFHEP00000009732 | ENSFHEP00000029776 | CREB binding protein b. | Retinoid X receptor, alpha a. | 0.722 |
| LOC105924936 | sirt1 | ENSFHEP00000009732 | ENSFHEP00000025372 | CREB binding protein b. | Sirtuin 1. | 0.683 |
| LOC105938548 | HDAC3 | ENSFHEP00000001764 | ENSFHEP00000020300 | Peroxisome proliferator-activated receptor alpha b. | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.825 |
page 1 of 5