STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105932344Zinc finger protein 710a. (700 aa)    
Predicted Functional Partners:
LOC105925877
Tripartite motif containing 33.
    
  0.542
LOC105933843
Uncharacterized protein.
    
  0.542
rps6kl1
Ribosomal protein S6 kinase-like 1.
    
 
 0.527
ENSFHEP00000000334
Uncharacterized protein.
    
  0.511
LOC105932118
POU domain protein.
    
 0.489
LOC105922837
BRCT domain-containing protein.
    
  0.479
LOC105917541
Orthodenticle homeobox 2b.
    
 
 0.476
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.468
gnrh2
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
    
 0.467
prrx1
Paired related homeobox 1a.
    
 
 0.462
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.