STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105926084Ankyrin repeat and SOCS box containing 14b. (584 aa)    
Predicted Functional Partners:
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.628
commd8
COMM domain containing 8.
    
  0.613
LOC105918616
Fleer.
    
 0.609
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.605
LOC105930277
NEDD8 ubiquitin like modifier.
    
  0.592
nedd8
NEDD8.
    
  0.592
psmd10
Proteasome 26S subunit, non-ATPase 10.
  
 
  0.581
commd4
COMM domain-containing protein 4.
    
 0.579
ubxn7
UBX domain protein 7.
    
 0.576
ift81
Intraflagellar transport 81 homolog.
    
 0.570
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.