STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105934564LYR motif containing 5a; Belongs to the complex I LYR family. (85 aa)    
Predicted Functional Partners:
etfa
Electron transfer flavoprotein subunit alpha.
   
 
 0.720
lyrm1
LYR motif containing 1; Belongs to the complex I LYR family.
      
 0.636
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.590
palb2
PALB2_WD40 domain-containing protein.
    
 
 0.590
etfb
Electron transfer flavoprotein subunit beta.
    
 
 0.586
mrpl46
39S ribosomal protein L46, mitochondrial.
    
   0.491
LYRM2
LYR motif containing 2; Belongs to the complex I LYR family.
   
  
 0.459
lyrm4
Si:ch211-152c8.4; Belongs to the complex I LYR family.
      
 0.424
ENSFHEP00000007506
Elongation of very long chain fatty acids protein.
      
 0.408
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.