STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105934590Uncharacterized protein. (662 aa)    
Predicted Functional Partners:
numa1
Uncharacterized protein.
    
 
 0.974
INSC
INSC spindle orientation adaptor protein.
    
 
 0.966
LOC105931793
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.824
LOC105933694
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.824
LOC105931781
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
   
 0.805
LOC105939839
FERM and PDZ domain containing 1b.
    
 
 0.800
ENSFHEP00000033071
FERM and PDZ domain containing 1a.
    
 
 0.800
ENSFHEP00000004180
PDZ domain-containing protein.
    
 
 0.781
whrn
Na(+)/H(+) exchange regulatory cofactor NHE-RF1.
    
 
 0.781
ENSFHEP00000023848
PDZ domain-containing protein.
    
 
 0.781
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.