STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000002247PDZ domain-containing protein. (125 aa)    
Predicted Functional Partners:
LOC105935141
Protein S100; Belongs to the S-100 family.
   
 0.906
ENSFHEP00000022571
Uncharacterized protein.
 
      0.819
MSL3
MSL complex subunit 3.
    
 0.766
anxa2
Annexin.
   
 0.705
LOC105920866
Annexin.
   
 0.705
anxa1
Annexin.
   
 0.705
nxf1
Zgc:153681.
    
 0.702
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.629
NCSTN
Nicastrin.
    
 0.581
LOC105935373
MSL complex subunit 2.
    
 0.574
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.