STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc173Coiled-coil domain-containing protein 173. (547 aa)    
Predicted Functional Partners:
spag8
Uncharacterized protein.
  
 
   0.887
ENSFHEP00000027982
Uncharacterized protein.
   
   0.883
cunh1orf194
Uncharacterized protein.
   
   0.875
tekt3
Tektin 3.
   
   0.872
cfap52
Cilia and flagella associated protein 52.
   
  0.869
LOC105915890
Cilia and flagella associated protein 45.
   
   0.867
mns1
Meiosis-specific nuclear structural 1.
   
  0.862
cunh9orf116
Uncharacterized protein.
    
   0.859
efhb
Uncharacterized protein.
    
   0.859
cfap20
Cilia and flagella associated protein 20.
    
   0.859
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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