STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbx8Chromobox homolog 8b. (366 aa)    
Predicted Functional Partners:
PCGF2
Polycomb group RING finger protein 2.
    
 0.964
RING1
Ring finger protein 1.
    
 0.917
rnf2
Ring finger protein 2.
    
 0.917
cbx4
Chromobox 4.
    
0.892
LOC105933040
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
0.892
LOC105937668
Chromobox protein.
    
0.854
eed
Embryonic ectoderm development.
    
 0.820
cbx2
Chromobox homolog 2 (Drosophila Pc class).
  
  
0.817
ENSFHEP00000015003
Uncharacterized protein.
    
 0.794
pcgf5
Polycomb group ring finger 5a.
    
 0.779
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.