STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traf2TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (516 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
    
 0.996
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.992
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
0.986
LOC105937601
Mitogen-activated protein kinase kinase kinase 14a.
    
 0.982
LOC105919828
Baculoviral IAP repeat containing 2.
   
 0.980
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.977
LOC105939294
Tumor necrosis factor receptor superfamily, member 1B.
   
 0.977
LOC105919032
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.974
map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.974
LOC105922112
Si:ch211-1i11.3.
    
 0.974
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.