STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000003043Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
LOC105939564
N-acetyltransferase domain-containing protein.
  
  
 
0.905
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.765
ENSFHEP00000011463
Si:ch211-81n22.1.
  
  
 
0.755
spaca6
Ig-like domain-containing protein.
    
 0.563
ENSFHEP00000024755
Sm domain-containing protein.
    
 0.563
naa38
N(alpha)-acetyltransferase 38, NatC auxiliary subunit.
    
 0.563
LOC105933784
Ribosomal modification protein rimK-like family member A.
     
 0.557
got2
Aspartate aminotransferase.
     
 0.519
asns
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.511
ENSFHEP00000012410
N-acetyltransferase domain-containing protein.
     
0.509
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.