STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
siaeSialic acid acetylesterase. (500 aa)    
Predicted Functional Partners:
ENSFHEP00000013498
Uncharacterized protein.
      
 0.616
casd1
CAS1 domain containing 1.
      
 0.600
urb1
URB1 ribosome biogenesis homolog.
      
 0.519
LOC105920236
Uncharacterized protein.
      
 0.512
st8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.478
actr5
Actin-related protein 5; Belongs to the actin family.
      
 0.445
htr2b
5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.
      
 0.426
LOC105915924
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
      
 0.414
man2b1
Alpha-mannosidase.
    
 
 0.412
man2b2
Alpha-mannosidase.
    
 
 0.412
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.