STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000003392Heart and neural crest derivatives expressed 2. (235 aa)    
Predicted Functional Partners:
gata4
GATA binding protein 4.
   
 0.776
nkx2-5
NK2 homeobox 5.
   
 
 0.773
tbx20
T-box transcription factor 20.
   
  
 0.697
LOC105936611
GATA binding protein 5.
   
 0.696
gata6
Transcription factor GATA-4.
   
 0.679
LOC105930785
T-box transcription factor 5a.
   
 0.669
brpf1
Uncharacterized protein.
    
 
 0.617
LOC105916285
Homeobox aristaless 4-like protein.
    
 0.610
ENSFHEP00000009623
BHLH domain-containing protein.
    
 0.609
tcf12
Transcription factor 12.
    
 0.609
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.