STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105927124Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
arhgap5
Rho GTPase activating protein 5.
    
 0.976
LOC105929367
Rho GTPase activating protein 35b.
    
 0.973
arhgap35
Rho GTPase-activating protein 5.
    
 0.973
arhgef1
Rho guanine nucleotide exchange factor (GEF) 1b.
   
 0.972
ARHGEF2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
   
 0.972
LOC105929517
Dishevelled associated activator of morphogenesis 1b.
    
 0.971
LOC105929964
Protein kinase N1b.
    
 0.970
daam2
Dishevelled associated activator of morphogenesis 2.
    
 0.963
pkn2
Protein kinase N2.
    
 0.962
ENSFHEP00000012259
Catenin (cadherin-associated protein), delta 1.
    
 0.960
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.