STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
depdc4Si:ch211-265o23.1. (543 aa)    
Predicted Functional Partners:
tcp11
Uncharacterized protein.
 
    
 0.851
ENSFHEP00000008919
Carbohydrate sulfotransferase.
      
 0.826
chst2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.826
pald1
Phosphatase domain containing paladin 1a.
      
 0.649
LOC105929709
Carbohydrate sulfotransferase.
      
 0.565
tecr
Trans-2,3-enoyl-CoA reductase b.
     
 0.476
LOC105932036
Trans-2,3-enoyl-CoA reductase a.
     
 0.476
ENSFHEP00000033483
Trans-2,3-enoyl-CoA reductase-like 2a.
     
 0.476
ENSFHEP00000032977
Uncharacterized protein.
   
    0.475
fam92a
Family with sequence similarity 92 member A1.
   
    0.432
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.